I am Jiawei Luo, PhD student at Oliver Stegle Lab. My research focuses on DNA language models and single-cell studies

My research interests focuses on developing AI/ML algorithms for Biology, including drug discovery, disease diagnosis, single-cell technologies and language model. I am particularly intrigued by the application of AI/ML techniques to address biological questions.

📖 Educations

  • M.S. in Computer Technology, Harbin Institute of Technology, Shenzhen, 2021.09 - 2024.03
  • B.S. in Software Engineering, Guangdong University of Foreign Studies, 2017.09 - 2021.06

🔥 News

  • Nov 2024:  🎉🎉, IMFP-LG is published in Genomics, Proteomics & Bioinformatics.
  • October 2023:  🎉🎉, BERT-DPPIV is accepted by ACS Omega.

📝 Publications

(*equal contribution, #corresponding)

Cell Systems (Under review)
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Controllable Protein Design by Prefix-Tuning Protein Language Models  

Jiawei Luo, Xianliang Liu, Jiahao Li, Qingcai Chen, Junjie Chen#

Keywords

  • Controllable Protein Design;
  • Prefix Tuning;
  • Protein Language Model;
Genomics, Proteomics & Bioinformatics
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Discovery of novel multi-functional peptides by using protein language models and graph-based deep learning

Jiawei Luo*, Kejuan Zhao*, Junjie Chen*#, Caihua Yang, Fuchuan Qu, Ke Yan, Yang Zhang, Bin Liu.

Keywords

  • Multi-functional Peptide Discovery;
  • Protein Language Model;
  • Graph Attention Network;
ACS Omega
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Exploration of DPP-IV Inhibitory Peptide Design Rules Assisted by the Deep Learning Pipeline That Identifies the Restriction Enzyme Cutting Site

Changge Guan*, Jiawei Luo*, Shucheng Li*, Zheng Lin Tan*, Yi Wang, Haihong Chen, Naoyuki Yamamoto, Chong Zhang, Yuan Lu, Junjie Chen, Xin-Hui Xing#.

Keywords

  • Peptide Design;
  • Protein Language Model;

🎖 Honors and Awards

  • September 2023, First Prize Winner, CBC2022 Competition(Protein Pre-training)
  • August 2022, First Prize Winner - CCAC 2022 AI-Debater Competition
  • 2021, 2022, 2023, University First Prize Scholarship, Harbin Institute of Technology(Shenzhen)

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